Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCL4P13236 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
CCL4P13236 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CCL4P13236 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCL4P13236 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL4P13236 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL4P13236 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL4P13236 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.52■□□□□ 0.23
CCL4P13236 AC025580.3-201ENST00000617932 1424 ntBASIC16.52■□□□□ 0.23
CCL4P13236 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCL4P13236 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL4P13236 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL4P13236 TNXA-203ENST00000507684 2038 ntBASIC16.52■□□□□ 0.23
CCL4P13236 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCL4P13236 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCL4P13236 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCL4P13236 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
CCL4P13236 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL4P13236 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.51■□□□□ 0.23
CCL4P13236 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL4P13236 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL4P13236 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL4P13236 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL4P13236 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL4P13236 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL4P13236 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL4P13236 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL4P13236 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.5■□□□□ 0.23
CCL4P13236 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL4P13236 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.5■□□□□ 0.23
CCL4P13236 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL4P13236 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.5■□□□□ 0.23
CCL4P13236 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL4P13236 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL4P13236 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL4P13236 AL138781.2-201ENST00000617896 1843 ntBASIC16.49■□□□□ 0.23
CCL4P13236 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 AC087289.5-201ENST00000586076 3175 ntBASIC16.49■□□□□ 0.23
CCL4P13236 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL4P13236 BX323043.1-201ENST00000641006 1765 ntBASIC16.49■□□□□ 0.23
CCL4P13236 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCL4P13236 FAM58CP-201ENST00000435741 640 ntBASIC16.49■□□□□ 0.23
CCL4P13236 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL4P13236 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL4P13236 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL4P13236 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms