Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.34□□□□□ -0.11
DEFA4P12838 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 AC087499.1-201ENST00000418141 1075 ntBASIC14.34□□□□□ -0.11
DEFA4P12838 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 SEC1P-202ENST00000473944 940 ntBASIC14.34□□□□□ -0.11
DEFA4P12838 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.34□□□□□ -0.11
DEFA4P12838 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.34□□□□□ -0.11
DEFA4P12838 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.34□□□□□ -0.11
DEFA4P12838 AC145285.6-201ENST00000604632 637 ntBASIC14.34□□□□□ -0.11
DEFA4P12838 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.34□□□□□ -0.11
DEFA4P12838 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DEFA4P12838 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
DEFA4P12838 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.33□□□□□ -0.11
DEFA4P12838 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.33□□□□□ -0.11
DEFA4P12838 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DEFA4P12838 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.33□□□□□ -0.12
DEFA4P12838 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 MIR3917-201ENST00000580971 93 ntBASIC14.33□□□□□ -0.12
DEFA4P12838 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.33□□□□□ -0.12
DEFA4P12838 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.33□□□□□ -0.12
DEFA4P12838 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 AC141257.4-201ENST00000634557 245 ntBASIC14.33□□□□□ -0.12
DEFA4P12838 AC136944.6-201ENST00000634818 245 ntBASIC14.33□□□□□ -0.12
DEFA4P12838 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
DEFA4P12838 LINC01126-201ENST00000623515 1646 ntBASIC14.33□□□□□ -0.12
DEFA4P12838 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
DEFA4P12838 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms