Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC025580.3-201ENST00000617932 1424 ntBASIC19.8■□□□□ 0.76
COL11A1P12107 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
COL11A1P12107 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.8■□□□□ 0.76
COL11A1P12107 AC096734.2-201ENST00000562054 433 ntBASIC19.8■□□□□ 0.76
COL11A1P12107 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.8■□□□□ 0.76
COL11A1P12107 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A1P12107 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A1P12107 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A1P12107 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL11A1P12107 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL11A1P12107 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL11A1P12107 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A1P12107 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A1P12107 AC022145.2-201ENST00000598203 171 ntBASIC19.79■□□□□ 0.76
COL11A1P12107 ACTL9-202ENST00000612068 1252 ntBASIC19.79■□□□□ 0.76
COL11A1P12107 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
COL11A1P12107 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A1P12107 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL11A1P12107 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A1P12107 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A1P12107 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A1P12107 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
COL11A1P12107 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL11A1P12107 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.78■□□□□ 0.76
COL11A1P12107 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.78■□□□□ 0.76
COL11A1P12107 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL11A1P12107 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.78■□□□□ 0.76
COL11A1P12107 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
COL11A1P12107 CYMP-203ENST00000474680 1263 ntBASIC19.78■□□□□ 0.76
COL11A1P12107 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.78■□□□□ 0.76
COL11A1P12107 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.78■□□□□ 0.76
COL11A1P12107 AC129492.6-201ENST00000611383 1305 ntBASIC19.78■□□□□ 0.76
COL11A1P12107 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.78■□□□□ 0.76
COL11A1P12107 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A1P12107 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL11A1P12107 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.77■□□□□ 0.76
COL11A1P12107 PI4KAP1-204ENST00000612579 1703 ntBASIC19.77■□□□□ 0.76
COL11A1P12107 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.77■□□□□ 0.76
COL11A1P12107 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 AC004461.1-201ENST00000412461 403 ntBASIC19.77■□□□□ 0.76
COL11A1P12107 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.77■□□□□ 0.76
COL11A1P12107 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.77■□□□□ 0.76
COL11A1P12107 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.77■□□□□ 0.76
COL11A1P12107 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.77■□□□□ 0.76
COL11A1P12107 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COL11A1P12107 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
COL11A1P12107 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A1P12107 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
COL11A1P12107 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
COL11A1P12107 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A1P12107 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A1P12107 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.77■□□□□ 0.75
COL11A1P12107 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL11A1P12107 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms