Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.97■□□□□ 0.15
FREM3P0C091 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FREM3P0C091 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FREM3P0C091 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.97■□□□□ 0.15
FREM3P0C091 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.97■□□□□ 0.15
FREM3P0C091 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.97■□□□□ 0.15
FREM3P0C091 OR7E14P-202ENST00000530490 1290 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 NKAPP1-205ENST00000585790 367 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 LINC01711-201ENST00000598340 967 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.97■□□□□ 0.15
FREM3P0C091 LINC00896-202ENST00000609602 2128 ntBASIC15.97■□□□□ 0.15
FREM3P0C091 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FREM3P0C091 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 LTB4R2-202ENST00000528054 3092 ntBASIC15.96■□□□□ 0.15
FREM3P0C091 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.96■□□□□ 0.15
FREM3P0C091 PP12613-201ENST00000424958 2230 ntBASIC15.96■□□□□ 0.15
FREM3P0C091 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.96■□□□□ 0.15
FREM3P0C091 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.96■□□□□ 0.15
FREM3P0C091 AC106820.2-201ENST00000563775 3264 ntBASIC15.96■□□□□ 0.15
FREM3P0C091 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FREM3P0C091 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 FGFR3P6-201ENST00000457012 610 ntBASIC15.96■□□□□ 0.15
FREM3P0C091 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FREM3P0C091 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
FREM3P0C091 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
FREM3P0C091 IL9RP2-201ENST00000423948 1312 ntBASIC15.96■□□□□ 0.15
FREM3P0C091 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FREM3P0C091 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FREM3P0C091 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FREM3P0C091 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FREM3P0C091 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
FREM3P0C091 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.95■□□□□ 0.14
FREM3P0C091 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 AC139887.3-201ENST00000568585 713 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 AC023511.2-201ENST00000618803 211 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.95■□□□□ 0.14
FREM3P0C091 AL356309.3-201ENST00000624132 1934 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.95■□□□□ 0.14
FREM3P0C091 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.95■□□□□ 0.14
FREM3P0C091 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 AF228730.7-201ENST00000641842 219 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FREM3P0C091 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.95■□□□□ 0.14
FREM3P0C091 AL645608.8-201ENST00000606034 2086 ntBASIC15.95■□□□□ 0.14
FREM3P0C091 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FREM3P0C091 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
FREM3P0C091 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FREM3P0C091 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 NCF1C-201ENST00000438382 1427 ntBASIC15.94■□□□□ 0.14
FREM3P0C091 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.94■□□□□ 0.14
FREM3P0C091 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FREM3P0C091 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms