Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SFTPBP07988 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SFTPBP07988 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SFTPBP07988 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.33■□□□□ 0.04
SFTPBP07988 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SFTPBP07988 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.33■□□□□ 0.04
SFTPBP07988 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
SFTPBP07988 AL157888.1-201ENST00000631930 593 ntBASIC15.33■□□□□ 0.04
SFTPBP07988 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.33■□□□□ 0.04
SFTPBP07988 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.33■□□□□ 0.04
SFTPBP07988 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SFTPBP07988 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.33■□□□□ 0.04
SFTPBP07988 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.32■□□□□ 0.04
SFTPBP07988 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 AL671277.2-201ENST00000458060 996 ntBASIC15.32■□□□□ 0.04
SFTPBP07988 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.32■□□□□ 0.04
SFTPBP07988 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.32■□□□□ 0.04
SFTPBP07988 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.32■□□□□ 0.04
SFTPBP07988 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.32■□□□□ 0.04
SFTPBP07988 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.32■□□□□ 0.04
SFTPBP07988 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
SFTPBP07988 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.32■□□□□ 0.04
SFTPBP07988 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 PP12613-201ENST00000424958 2230 ntBASIC15.32■□□□□ 0.04
SFTPBP07988 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SFTPBP07988 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SFTPBP07988 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SFTPBP07988 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SFTPBP07988 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.31■□□□□ 0.04
SFTPBP07988 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SFTPBP07988 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.31■□□□□ 0.04
SFTPBP07988 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 SPDYE15P-201ENST00000424157 909 ntBASIC15.31■□□□□ 0.04
SFTPBP07988 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SFTPBP07988 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 PVRIG2P-201ENST00000435460 978 ntBASIC15.31■□□□□ 0.04
SFTPBP07988 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SFTPBP07988 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.31■□□□□ 0.04
SFTPBP07988 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms