Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CAPN1P07384 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CAPN1P07384 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPN1P07384 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CAPN1P07384 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CAPN1P07384 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN1P07384 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN1P07384 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.34■□□□□ 0.37
CAPN1P07384 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN1P07384 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 AC024563.2-201ENST00000603282 481 ntBASIC17.34■□□□□ 0.37
CAPN1P07384 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.34■□□□□ 0.37
CAPN1P07384 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAPN1P07384 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAPN1P07384 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CAPN1P07384 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CAPN1P07384 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.33■□□□□ 0.37
CAPN1P07384 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 AC133963.1-201ENST00000504166 1679 ntBASIC17.33■□□□□ 0.37
CAPN1P07384 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CAPN1P07384 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAPN1P07384 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CAPN1P07384 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CAPN1P07384 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 IGHGP-201ENST00000390555 1178 ntBASIC17.33■□□□□ 0.36
CAPN1P07384 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.33■□□□□ 0.36
CAPN1P07384 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.33■□□□□ 0.36
CAPN1P07384 PRELID1P1-202ENST00000567272 903 ntBASIC17.33■□□□□ 0.36
CAPN1P07384 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.33■□□□□ 0.36
CAPN1P07384 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN1P07384 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAPN1P07384 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CAPN1P07384 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN1P07384 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN1P07384 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN1P07384 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN1P07384 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN1P07384 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CAPN1P07384 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN1P07384 TPM4P1-201ENST00000436100 807 ntBASIC17.32■□□□□ 0.36
CAPN1P07384 NUS1P1-201ENST00000446295 882 ntBASIC17.32■□□□□ 0.36
CAPN1P07384 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN1P07384 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms