Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.07■□□□□ 0.32
KRT6AP02538 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 AC005104.2-201ENST00000427818 678 ntBASIC17.07■□□□□ 0.32
KRT6AP02538 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT6AP02538 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.07■□□□□ 0.32
KRT6AP02538 VENTXP5-201ENST00000523979 775 ntBASIC17.07■□□□□ 0.32
KRT6AP02538 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 AL390719.2-201ENST00000606993 987 ntBASIC17.07■□□□□ 0.32
KRT6AP02538 HYMAI.1-201ENST00000620949 238 ntBASIC17.07■□□□□ 0.32
KRT6AP02538 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.07■□□□□ 0.32
KRT6AP02538 NFIC-211ENST00000641145 8399 ntBASIC17.07■□□□□ 0.32
KRT6AP02538 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
KRT6AP02538 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KRT6AP02538 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT6AP02538 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT6AP02538 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT6AP02538 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT6AP02538 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT6AP02538 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
KRT6AP02538 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 CROCCP1-201ENST00000426910 5675 ntBASIC17.06■□□□□ 0.32
KRT6AP02538 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT6AP02538 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT6AP02538 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT6AP02538 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6AP02538 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6AP02538 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6AP02538 AC096633.1-201ENST00000422446 749 ntBASIC17.05■□□□□ 0.32
KRT6AP02538 LINC01238-205ENST00000567549 1107 ntBASIC17.05■□□□□ 0.32
KRT6AP02538 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT6AP02538 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 Z83836.1-201ENST00000624605 1642 ntBASIC17.05■□□□□ 0.32
KRT6AP02538 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT6AP02538 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.05■□□□□ 0.32
KRT6AP02538 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
KRT6AP02538 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT6AP02538 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT6AP02538 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT6AP02538 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 AC012313.1-201ENST00000593393 3059 ntBASIC17.04■□□□□ 0.32
KRT6AP02538 AC099398.1-201ENST00000567919 2776 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms