Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN1O95832 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.71■□□□□ 0.11
CLDN1O95832 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN1O95832 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLDN1O95832 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.71■□□□□ 0.1
CLDN1O95832 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLDN1O95832 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN1O95832 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 AL139400.1-201ENST00000366220 510 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN1O95832 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN1O95832 TSEN15P1-201ENST00000423257 515 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN1O95832 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.7■□□□□ 0.1
CLDN1O95832 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 AC018845.2-201ENST00000568326 409 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 AC006557.2-201ENST00000592985 1240 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 AC093512.1-201ENST00000617969 520 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN1O95832 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.7■□□□□ 0.1
CLDN1O95832 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN1O95832 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN1O95832 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLDN1O95832 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN1O95832 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN1O95832 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CLDN1O95832 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN1O95832 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN1O95832 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN1O95832 AC136632.2-201ENST00000512891 861 ntBASIC15.69■□□□□ 0.1
CLDN1O95832 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN1O95832 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CLDN1O95832 AL022326.1-202ENST00000641533 845 ntBASIC15.69■□□□□ 0.1
CLDN1O95832 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN1O95832 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN1O95832 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms