Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.86■□□□□ 0.61
CSPG5O95196 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.86■□□□□ 0.61
CSPG5O95196 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.86■□□□□ 0.61
CSPG5O95196 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.86■□□□□ 0.61
CSPG5O95196 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CSPG5O95196 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSPG5O95196 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CSPG5O95196 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 MCCD1P2-201ENST00000423228 335 ntBASIC18.85■□□□□ 0.61
CSPG5O95196 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.85■□□□□ 0.61
CSPG5O95196 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 CEND1P1-201ENST00000451006 455 ntBASIC18.85■□□□□ 0.61
CSPG5O95196 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.85■□□□□ 0.61
CSPG5O95196 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 PGM5P2-202ENST00000637225 1043 ntBASIC18.85■□□□□ 0.61
CSPG5O95196 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CSPG5O95196 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSPG5O95196 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
CSPG5O95196 AC002310.6-201ENST00000624451 1377 ntBASIC18.84■□□□□ 0.61
CSPG5O95196 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CSPG5O95196 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.84■□□□□ 0.61
CSPG5O95196 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CSPG5O95196 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.84■□□□□ 0.61
CSPG5O95196 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 AC004790.2-201ENST00000623588 572 ntBASIC18.84■□□□□ 0.61
CSPG5O95196 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSPG5O95196 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CSPG5O95196 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.84■□□□□ 0.61
CSPG5O95196 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSPG5O95196 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CSPG5O95196 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSPG5O95196 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.83■□□□□ 0.61
CSPG5O95196 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CSPG5O95196 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSPG5O95196 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CSPG5O95196 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSPG5O95196 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.83■□□□□ 0.6
CSPG5O95196 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms