Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.22■□□□□ 0.19
NKX2-2O95096 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX2-2O95096 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NKX2-2O95096 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.22■□□□□ 0.19
NKX2-2O95096 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.22■□□□□ 0.19
NKX2-2O95096 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NKX2-2O95096 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NKX2-2O95096 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NKX2-2O95096 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-2O95096 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NKX2-2O95096 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX2-2O95096 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX2-2O95096 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX2-2O95096 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
NKX2-2O95096 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.21■□□□□ 0.19
NKX2-2O95096 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX2-2O95096 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.21■□□□□ 0.19
NKX2-2O95096 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.21■□□□□ 0.19
NKX2-2O95096 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-2O95096 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.21■□□□□ 0.19
NKX2-2O95096 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
NKX2-2O95096 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NKX2-2O95096 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NKX2-2O95096 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.21■□□□□ 0.18
NKX2-2O95096 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
NKX2-2O95096 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.21■□□□□ 0.18
NKX2-2O95096 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX2-2O95096 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NKX2-2O95096 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-2O95096 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 AC046185.3-201ENST00000623228 1824 ntBASIC16.2■□□□□ 0.18
NKX2-2O95096 AC132938.5-201ENST00000624980 1813 ntBASIC16.2■□□□□ 0.18
NKX2-2O95096 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 AC003669.1-201ENST00000334569 611 ntBASIC16.2■□□□□ 0.18
NKX2-2O95096 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
NKX2-2O95096 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-2O95096 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.2■□□□□ 0.18
NKX2-2O95096 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.2■□□□□ 0.18
NKX2-2O95096 MIR5100-201ENST00000579544 119 ntBASIC16.2■□□□□ 0.18
NKX2-2O95096 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.2■□□□□ 0.18
NKX2-2O95096 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-2O95096 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
NKX2-2O95096 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.2■□□□□ 0.18
NKX2-2O95096 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NKX2-2O95096 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NKX2-2O95096 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 PMPCAP1-201ENST00000508114 1576 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms