Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST1O76090 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
BEST1O76090 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST1O76090 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.43■□□□□ 0.54
BEST1O76090 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST1O76090 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.43■□□□□ 0.54
BEST1O76090 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.43■□□□□ 0.54
BEST1O76090 AP001005.1-201ENST00000571755 1248 ntBASIC18.43■□□□□ 0.54
BEST1O76090 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.43■□□□□ 0.54
BEST1O76090 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 AC064862.7-201ENST00000604520 867 ntBASIC18.43■□□□□ 0.54
BEST1O76090 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 GNAS-203ENST00000306120 1878 ntBASIC18.43■□□□□ 0.54
BEST1O76090 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST1O76090 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST1O76090 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST1O76090 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
BEST1O76090 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BEST1O76090 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
BEST1O76090 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.42■□□□□ 0.54
BEST1O76090 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 MYCLP1-201ENST00000372451 1075 ntBASIC18.42■□□□□ 0.54
BEST1O76090 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.42■□□□□ 0.54
BEST1O76090 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST1O76090 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
BEST1O76090 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.42■□□□□ 0.54
BEST1O76090 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.42■□□□□ 0.54
BEST1O76090 AL139327.4-201ENST00000612362 153 ntBASIC18.42■□□□□ 0.54
BEST1O76090 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.42■□□□□ 0.54
BEST1O76090 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST1O76090 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST1O76090 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST1O76090 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
BEST1O76090 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST1O76090 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
BEST1O76090 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.41■□□□□ 0.54
BEST1O76090 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 OR7E14P-202ENST00000530490 1290 ntBASIC18.41■□□□□ 0.54
BEST1O76090 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST1O76090 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST1O76090 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
BEST1O76090 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 AC243591.1-201ENST00000452967 1364 ntBASIC18.41■□□□□ 0.54
BEST1O76090 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.41■□□□□ 0.54
BEST1O76090 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST1O76090 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST1O76090 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
BEST1O76090 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
BEST1O76090 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms