Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 PI4KAP1-204ENST00000612579 1703 ntBASIC7.75□□□□□ -1.17
USH2AO75445 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
USH2AO75445 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 AP006294.1-201ENST00000415407 339 ntBASIC7.75□□□□□ -1.17
USH2AO75445 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC7.75□□□□□ -1.17
USH2AO75445 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 AC006538.1-201ENST00000567905 1585 ntBASIC7.75□□□□□ -1.17
USH2AO75445 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 MIR4453-201ENST00000584019 89 ntBASIC7.75□□□□□ -1.17
USH2AO75445 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 REEP4-207ENST00000523293 913 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 MIR4722-201ENST00000578292 60 ntBASIC7.75□□□□□ -1.17
USH2AO75445 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 AC004840.1-201ENST00000636359 365 ntBASIC7.75□□□□□ -1.17
USH2AO75445 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
USH2AO75445 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
USH2AO75445 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC7.75□□□□□ -1.17
USH2AO75445 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC7.75□□□□□ -1.17
USH2AO75445 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC7.75□□□□□ -1.17
USH2AO75445 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
USH2AO75445 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
USH2AO75445 AC241585.1-201ENST00000433527 519 ntBASIC7.74□□□□□ -1.17
USH2AO75445 AC234783.1-201ENST00000441761 496 ntBASIC7.74□□□□□ -1.17
USH2AO75445 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 AC073592.8-201ENST00000624126 511 ntBASIC7.74□□□□□ -1.17
USH2AO75445 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
USH2AO75445 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC7.74□□□□□ -1.17
USH2AO75445 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 RARRES2P8-201ENST00000566335 367 ntBASIC7.74□□□□□ -1.17
USH2AO75445 AL021578.1-201ENST00000613646 709 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms