Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
PFDN1O60925 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PFDN1O60925 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.71■□□□□ 0.11
PFDN1O60925 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PFDN1O60925 HLA-G-202ENST00000376815 851 ntBASIC15.71■□□□□ 0.11
PFDN1O60925 HLA-G-203ENST00000376818 1127 ntBASIC15.71■□□□□ 0.11
PFDN1O60925 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.71■□□□□ 0.11
PFDN1O60925 AL138724.1-201ENST00000606771 1088 ntBASIC15.71■□□□□ 0.11
PFDN1O60925 AC136469.2-201ENST00000623944 1028 ntBASIC15.71■□□□□ 0.11
PFDN1O60925 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PFDN1O60925 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.71■□□□□ 0.11
PFDN1O60925 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PFDN1O60925 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PFDN1O60925 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.71■□□□□ 0.11
PFDN1O60925 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PFDN1O60925 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PFDN1O60925 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
PFDN1O60925 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PFDN1O60925 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 AC023908.3-201ENST00000564211 3047 ntBASIC15.7■□□□□ 0.1
PFDN1O60925 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.7■□□□□ 0.1
PFDN1O60925 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.7■□□□□ 0.1
PFDN1O60925 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 GRK6P1-201ENST00000400595 1711 ntBASIC15.7■□□□□ 0.1
PFDN1O60925 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.7■□□□□ 0.1
PFDN1O60925 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PFDN1O60925 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PFDN1O60925 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PFDN1O60925 AC092364.2-201ENST00000596710 2692 ntBASIC15.7■□□□□ 0.1
PFDN1O60925 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.69■□□□□ 0.1
PFDN1O60925 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.69■□□□□ 0.1
PFDN1O60925 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PFDN1O60925 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.69■□□□□ 0.1
PFDN1O60925 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.69■□□□□ 0.1
PFDN1O60925 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms