Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.81■□□□□ 0.12
ZIC3O60481 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.81■□□□□ 0.12
ZIC3O60481 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.81■□□□□ 0.12
ZIC3O60481 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
ZIC3O60481 AL139327.4-201ENST00000612362 153 ntBASIC15.81■□□□□ 0.12
ZIC3O60481 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ZIC3O60481 AL773604.1-201ENST00000617417 272 ntBASIC15.81■□□□□ 0.12
ZIC3O60481 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZIC3O60481 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.81■□□□□ 0.12
ZIC3O60481 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.8■□□□□ 0.12
ZIC3O60481 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.8■□□□□ 0.12
ZIC3O60481 AL031284.1-201ENST00000419297 478 ntBASIC15.8■□□□□ 0.12
ZIC3O60481 RPS2P1-201ENST00000434010 821 ntBASIC15.8■□□□□ 0.12
ZIC3O60481 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ZIC3O60481 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
ZIC3O60481 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ZIC3O60481 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ZIC3O60481 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
ZIC3O60481 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
ZIC3O60481 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.79■□□□□ 0.12
ZIC3O60481 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.79■□□□□ 0.12
ZIC3O60481 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 FAM215A-202ENST00000632077 792 ntBASIC15.79■□□□□ 0.12
ZIC3O60481 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.79■□□□□ 0.12
ZIC3O60481 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ZIC3O60481 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.78■□□□□ 0.12
ZIC3O60481 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.78■□□□□ 0.12
ZIC3O60481 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ZIC3O60481 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
ZIC3O60481 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZIC3O60481 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms