Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.19■□□□□ 0.82
CYTH3O43739 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CYTH3O43739 AC107918.4-202ENST00000641623 219 ntBASIC20.19■□□□□ 0.82
CYTH3O43739 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CYTH3O43739 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.19■□□□□ 0.82
CYTH3O43739 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.19■□□□□ 0.82
CYTH3O43739 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYTH3O43739 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 LINC00896-202ENST00000609602 2128 ntBASIC20.18■□□□□ 0.82
CYTH3O43739 AC046185.3-201ENST00000623228 1824 ntBASIC20.18■□□□□ 0.82
CYTH3O43739 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.18■□□□□ 0.82
CYTH3O43739 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CYTH3O43739 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CYTH3O43739 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.18■□□□□ 0.82
CYTH3O43739 SIGLEC30P-201ENST00000455569 941 ntBASIC20.18■□□□□ 0.82
CYTH3O43739 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CYTH3O43739 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.18■□□□□ 0.82
CYTH3O43739 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.18■□□□□ 0.82
CYTH3O43739 AP001005.1-201ENST00000571755 1248 ntBASIC20.18■□□□□ 0.82
CYTH3O43739 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.18■□□□□ 0.82
CYTH3O43739 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.18■□□□□ 0.82
CYTH3O43739 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 AC243591.1-201ENST00000452967 1364 ntBASIC20.18■□□□□ 0.82
CYTH3O43739 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CYTH3O43739 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYTH3O43739 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CYTH3O43739 PP12613-201ENST00000424958 2230 ntBASIC20.17■□□□□ 0.82
CYTH3O43739 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.17■□□□□ 0.82
CYTH3O43739 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.17■□□□□ 0.82
CYTH3O43739 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYTH3O43739 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CYTH3O43739 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 AL135999.2-201ENST00000622438 1686 ntBASIC20.16■□□□□ 0.82
CYTH3O43739 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.16■□□□□ 0.82
CYTH3O43739 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 OR7E14P-202ENST00000530490 1290 ntBASIC20.16■□□□□ 0.82
CYTH3O43739 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.16■□□□□ 0.82
CYTH3O43739 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.16■□□□□ 0.82
CYTH3O43739 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.16■□□□□ 0.82
CYTH3O43739 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.16■□□□□ 0.82
CYTH3O43739 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
CYTH3O43739 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.16■□□□□ 0.82
CYTH3O43739 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.16■□□□□ 0.82
CYTH3O43739 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.16■□□□□ 0.82
CYTH3O43739 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYTH3O43739 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYTH3O43739 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYTH3O43739 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CYTH3O43739 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CYTH3O43739 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.15■□□□□ 0.82
CYTH3O43739 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.15■□□□□ 0.82
CYTH3O43739 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CYTH3O43739 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms