Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.58■□□□□ 0.4
MID1O15344 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MID1O15344 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 AC108751.1-201ENST00000490852 363 ntBASIC17.58■□□□□ 0.4
MID1O15344 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.58■□□□□ 0.4
MID1O15344 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.58■□□□□ 0.4
MID1O15344 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.58■□□□□ 0.4
MID1O15344 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.58■□□□□ 0.4
MID1O15344 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
MID1O15344 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MID1O15344 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.58■□□□□ 0.4
MID1O15344 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.58■□□□□ 0.4
MID1O15344 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.58■□□□□ 0.4
MID1O15344 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.57■□□□□ 0.4
MID1O15344 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 AC138028.4-201ENST00000564984 1845 ntBASIC17.57■□□□□ 0.4
MID1O15344 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MID1O15344 MIR1233-2-201ENST00000408138 82 ntBASIC17.57■□□□□ 0.4
MID1O15344 MIR1233-1-201ENST00000408722 82 ntBASIC17.57■□□□□ 0.4
MID1O15344 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.57■□□□□ 0.4
MID1O15344 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.57■□□□□ 0.4
MID1O15344 AC002558.1-201ENST00000488906 803 ntBASIC17.57■□□□□ 0.4
MID1O15344 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.57■□□□□ 0.4
MID1O15344 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.57■□□□□ 0.4
MID1O15344 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.57■□□□□ 0.4
MID1O15344 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MID1O15344 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.57■□□□□ 0.4
MID1O15344 AC009336.1-201ENST00000608941 1553 ntBASIC17.57■□□□□ 0.4
MID1O15344 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MID1O15344 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MID1O15344 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MID1O15344 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.56■□□□□ 0.4
MID1O15344 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.56■□□□□ 0.4
MID1O15344 RNA5SP416-201ENST00000516838 111 ntBASIC17.56■□□□□ 0.4
MID1O15344 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.56■□□□□ 0.4
MID1O15344 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 AL139424.1-201ENST00000607572 797 ntBASIC17.56■□□□□ 0.4
MID1O15344 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
MID1O15344 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 BCL2-203ENST00000589955 5011 ntBASIC17.56■□□□□ 0.4
MID1O15344 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MID1O15344 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
MID1O15344 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MID1O15344 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MID1O15344 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.55■□□□□ 0.4
MID1O15344 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.55■□□□□ 0.4
MID1O15344 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms