Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC079776.1-201ENST00000401540 1152 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 AC087163.2-201ENST00000457299 853 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 SLC25A39P2-201ENST00000537614 270 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRANK1O15050 AC073592.3-201ENST00000625118 1834 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 AC069120.2-201ENST00000524091 540 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.29■□□□□ 0.52
TRANK1O15050 AL158211.3-201ENST00000607385 239 ntBASIC18.29■□□□□ 0.52
TRANK1O15050 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRANK1O15050 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRANK1O15050 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.29■□□□□ 0.52
TRANK1O15050 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TRANK1O15050 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.28■□□□□ 0.52
TRANK1O15050 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
TRANK1O15050 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRANK1O15050 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.28■□□□□ 0.52
TRANK1O15050 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRANK1O15050 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.28■□□□□ 0.52
TRANK1O15050 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.27■□□□□ 0.52
TRANK1O15050 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 PIN1P1-201ENST00000412108 996 ntBASIC18.27■□□□□ 0.52
TRANK1O15050 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.27■□□□□ 0.52
TRANK1O15050 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.27■□□□□ 0.52
TRANK1O15050 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.27■□□□□ 0.52
TRANK1O15050 HILS1-202ENST00000545329 423 ntBASIC18.27■□□□□ 0.52
TRANK1O15050 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.27■□□□□ 0.52
TRANK1O15050 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRANK1O15050 STK19B-204ENST00000512515 211 ntBASIC18.27■□□□□ 0.52
TRANK1O15050 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.27■□□□□ 0.52
TRANK1O15050 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.27■□□□□ 0.52
TRANK1O15050 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRANK1O15050 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRANK1O15050 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRANK1O15050 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.27■□□□□ 0.51
TRANK1O15050 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRANK1O15050 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TRANK1O15050 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRANK1O15050 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.26■□□□□ 0.51
TRANK1O15050 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.26■□□□□ 0.51
TRANK1O15050 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.26■□□□□ 0.51
TRANK1O15050 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRANK1O15050 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms