Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
AP3D1O14617 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.5■□□□□ 0.23
AP3D1O14617 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3D1O14617 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3D1O14617 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.5■□□□□ 0.23
AP3D1O14617 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
AP3D1O14617 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP3D1O14617 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3D1O14617 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3D1O14617 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
AP3D1O14617 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 FER1L4-210ENST00000615531 5998 ntBASIC16.49■□□□□ 0.23
AP3D1O14617 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
AP3D1O14617 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3D1O14617 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 HLA-F-220ENST00000434407 884 ntBASIC16.49■□□□□ 0.23
AP3D1O14617 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.49■□□□□ 0.23
AP3D1O14617 AC113404.2-201ENST00000507884 177 ntBASIC16.49■□□□□ 0.23
AP3D1O14617 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.49■□□□□ 0.23
AP3D1O14617 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.49■□□□□ 0.23
AP3D1O14617 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP3D1O14617 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
AP3D1O14617 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP3D1O14617 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 AD000864.1-201ENST00000624076 2295 ntBASIC16.48■□□□□ 0.23
AP3D1O14617 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3D1O14617 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.48■□□□□ 0.23
AP3D1O14617 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.48■□□□□ 0.23
AP3D1O14617 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.48■□□□□ 0.23
AP3D1O14617 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
AP3D1O14617 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
AP3D1O14617 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP3D1O14617 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.48■□□□□ 0.23
AP3D1O14617 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.48■□□□□ 0.23
AP3D1O14617 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 AC133963.1-201ENST00000504166 1679 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms