Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COPEO14579 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COPEO14579 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.61■□□□□ 0.41
COPEO14579 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
COPEO14579 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPEO14579 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
COPEO14579 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COPEO14579 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
COPEO14579 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.6■□□□□ 0.41
COPEO14579 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 INGX-201ENST00000359239 846 ntBASIC17.6■□□□□ 0.41
COPEO14579 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.6■□□□□ 0.41
COPEO14579 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 AC128688.1-201ENST00000487626 519 ntBASIC17.6■□□□□ 0.41
COPEO14579 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.6■□□□□ 0.41
COPEO14579 EGLN1P1-201ENST00000531623 762 ntBASIC17.6■□□□□ 0.41
COPEO14579 AL512604.3-201ENST00000569583 964 ntBASIC17.6■□□□□ 0.41
COPEO14579 NEK4P2-201ENST00000580004 1012 ntBASIC17.6■□□□□ 0.41
COPEO14579 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 BX276092.7-203ENST00000637198 1536 ntBASIC17.6■□□□□ 0.41
COPEO14579 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.6■□□□□ 0.41
COPEO14579 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COPEO14579 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
COPEO14579 PCDHB19P-201ENST00000570871 2371 ntBASIC17.6■□□□□ 0.41
COPEO14579 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COPEO14579 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPEO14579 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COPEO14579 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.59■□□□□ 0.41
COPEO14579 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.59■□□□□ 0.41
COPEO14579 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COPEO14579 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COPEO14579 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
COPEO14579 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COPEO14579 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COPEO14579 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.58■□□□□ 0.41
COPEO14579 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.58■□□□□ 0.41
COPEO14579 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
COPEO14579 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.58■□□□□ 0.41
COPEO14579 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COPEO14579 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.58■□□□□ 0.4
COPEO14579 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.58■□□□□ 0.4
COPEO14579 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.58■□□□□ 0.4
COPEO14579 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
COPEO14579 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COPEO14579 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms