Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.51■■□□□ 1.19
CHL1O00533 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.51■■□□□ 1.19
CHL1O00533 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC22.51■■□□□ 1.19
CHL1O00533 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CHL1O00533 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CHL1O00533 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.51■■□□□ 1.19
CHL1O00533 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CHL1O00533 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.51■■□□□ 1.19
CHL1O00533 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 GPR89P-201ENST00000407924 1495 ntBASIC22.5■■□□□ 1.19
CHL1O00533 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.5■■□□□ 1.19
CHL1O00533 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.5■■□□□ 1.19
CHL1O00533 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.5■■□□□ 1.19
CHL1O00533 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.5■■□□□ 1.19
CHL1O00533 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC22.5■■□□□ 1.19
CHL1O00533 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CHL1O00533 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHL1O00533 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.49■■□□□ 1.19
CHL1O00533 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CHL1O00533 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.49■■□□□ 1.19
CHL1O00533 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 AC009947.1-201ENST00000444350 727 ntBASIC22.49■■□□□ 1.19
CHL1O00533 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.49■■□□□ 1.19
CHL1O00533 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.49■■□□□ 1.19
CHL1O00533 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CHL1O00533 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 AL590787.1-201ENST00000568856 1315 ntBASIC22.49■■□□□ 1.19
CHL1O00533 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHL1O00533 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.49■■□□□ 1.19
CHL1O00533 AC104109.2-201ENST00000602919 1418 ntBASIC22.48■■□□□ 1.19
CHL1O00533 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.48■■□□□ 1.19
CHL1O00533 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CHL1O00533 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.48■■□□□ 1.19
CHL1O00533 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.48■■□□□ 1.19
CHL1O00533 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.48■■□□□ 1.19
CHL1O00533 Z83851.2-201ENST00000609564 659 ntBASIC22.48■■□□□ 1.19
CHL1O00533 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.48■■□□□ 1.19
CHL1O00533 PGM5P2-202ENST00000637225 1043 ntBASIC22.48■■□□□ 1.19
CHL1O00533 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC22.48■■□□□ 1.19
CHL1O00533 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CHL1O00533 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.48■■□□□ 1.19
CHL1O00533 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.48■■□□□ 1.19
CHL1O00533 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CHL1O00533 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHL1O00533 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.47■■□□□ 1.19
CHL1O00533 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC22.47■■□□□ 1.19
CHL1O00533 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.47■■□□□ 1.19
CHL1O00533 PTCHD3P3-201ENST00000403073 906 ntBASIC22.47■■□□□ 1.19
CHL1O00533 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHL1O00533 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
CHL1O00533 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.47■■□□□ 1.19
CHL1O00533 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.47■■□□□ 1.19
CHL1O00533 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms