Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC022188.1-201ENST00000620960 1664 ntBASIC12.54□□□□□ -0.4
LINC01549A6NIU2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.54□□□□□ -0.4
LINC01549A6NIU2 KSR1P1-201ENST00000446298 240 ntBASIC12.54□□□□□ -0.4
LINC01549A6NIU2 FAM207BP-201ENST00000447172 505 ntBASIC12.54□□□□□ -0.4
LINC01549A6NIU2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AL353708.3-201ENST00000610272 989 ntBASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01549A6NIU2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CYP2T1P-202ENST00000641596 2535 ntBASIC12.53□□□□□ -0.4
LINC01549A6NIU2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ZNRF2P3-201ENST00000424200 374 ntBASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC01549A6NIU2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01549A6NIU2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01549A6NIU2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01549A6NIU2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC01549A6NIU2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC01549A6NIU2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC01549A6NIU2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms