Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPDYE2BA6NHP3 PI4KAP1-204ENST00000612579 1703 ntBASIC20.81■□□□□ 0.92
SPDYE2BA6NHP3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPDYE2BA6NHP3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AL020996.1-203ENST00000536896 2307 ntBASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AP000344.2-201ENST00000512987 629 ntBASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AC007064.4-201ENST00000637740 555 ntBASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPDYE2BA6NHP3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 ACTG1P4-201ENST00000425123 1122 ntBASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 AC106028.4-201ENST00000614509 607 ntBASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 AC092902.6-201ENST00000641783 218 ntBASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 AP000997.3-201ENST00000623333 2250 ntBASIC20.79■□□□□ 0.92
SPDYE2BA6NHP3 AL590787.1-201ENST00000568856 1315 ntBASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 SSR1P1-201ENST00000407630 814 ntBASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 CXCL1P1-201ENST00000502804 216 ntBASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.78■□□□□ 0.92
SPDYE2BA6NHP3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 AL139400.1-201ENST00000366220 510 ntBASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.77■□□□□ 0.92
SPDYE2BA6NHP3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms