Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC004706.3-202ENST00000621574 984 ntBASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 OR6D1P-202ENST00000641007 5290 ntBASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TBC1D3FA6NER0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.49■□□□□ 0.39
TBC1D3FA6NER0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 AC108751.1-201ENST00000490852 363 ntBASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 STK25P1-201ENST00000585406 838 ntBASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 AC009113.1-201ENST00000570267 2443 ntBASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
TBC1D3FA6NER0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.47■□□□□ 0.39
TBC1D3FA6NER0 AC006504.4-201ENST00000592118 1568 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms