Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.11■□□□□ 0.65
CCDC66A2RUB6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 UNC93B2-201ENST00000285383 730 ntBASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.11■□□□□ 0.65
CCDC66A2RUB6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC66A2RUB6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 KRT18P55-202ENST00000578578 1546 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AC092338.2-201ENST00000568827 1415 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 CCR12P-201ENST00000446203 998 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AC008550.1-201ENST00000511500 884 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 AC006116.8-202ENST00000587620 1550 ntBASIC19.1■□□□□ 0.65
CCDC66A2RUB6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC66A2RUB6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 LINC02199-201ENST00000506655 2702 ntBASIC19.09■□□□□ 0.65
CCDC66A2RUB6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.09■□□□□ 0.65
CCDC66A2RUB6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 RBM17P1-201ENST00000453646 1190 ntBASIC19.09■□□□□ 0.65
CCDC66A2RUB6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 BX088651.1-201ENST00000540551 451 ntBASIC19.09■□□□□ 0.65
CCDC66A2RUB6 AC104390.1-201ENST00000555663 520 ntBASIC19.09■□□□□ 0.65
CCDC66A2RUB6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC66A2RUB6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms