Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 FLJ38576-201ENST00000623820 2459 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 KRT8P47-201ENST00000604727 1398 ntBASIC13.7□□□□□ -0.22
TRAV5A0A0B4J249 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 FITM1-202ENST00000559294 800 ntBASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV5A0A0B4J249 NFIC-211ENST00000641145 8399 ntBASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 LYSMD4-203ENST00000378904 2122 ntBASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DDX43P3-201ENST00000441064 443 ntBASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MIR3917-201ENST00000580971 93 ntBASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV5A0A0B4J249 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms