Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC078925.2-201ENST00000624013 1973 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 KRT18P38-201ENST00000449496 1282 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC005332.3-201ENST00000589904 676 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 AC139887.4-201ENST00000607877 719 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 HYMAI.1-201ENST00000620949 238 ntBASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV5-3A0A0A0MS03 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV5-3A0A0A0MS03 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.46■□□□□ 0.22
TRBV5-3A0A0A0MS03 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC073508.3-201ENST00000619697 1419 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 RNF216P1-203ENST00000404404 2427 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 MYCLP1-201ENST00000372451 1075 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 VENTXP5-201ENST00000523979 775 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC124947.2-201ENST00000547118 1133 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 RNF126P1-202ENST00000569893 925 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC018695.7-201ENST00000624587 2492 ntBASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV5-3A0A0A0MS03 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC117947.1-201ENST00000427448 529 ntBASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 LIN28AP1-201ENST00000429574 405 ntBASIC16.44■□□□□ 0.22
TRBV5-3A0A0A0MS03 AC007967.3-201ENST00000434308 558 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms