Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 RHOQP3-201ENST00000437982 621 ntBASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AC074386.1-202ENST00000463561 864 ntBASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AP000344.2-201ENST00000512987 629 ntBASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC187A0A096LP49 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 CROCCP3-202ENST00000420820 1947 ntBASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 MYCLP1-201ENST00000372451 1075 ntBASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC023141.13-201ENST00000604991 943 ntBASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 AC106028.4-201ENST00000614509 607 ntBASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC187A0A096LP49 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CCDC187A0A096LP49 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC187A0A096LP49 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC187A0A096LP49 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC187A0A096LP49 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC187A0A096LP49 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 AC002558.1-201ENST00000488906 803 ntBASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 AC027612.4-201ENST00000605371 583 ntBASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 AC025580.3-201ENST00000617932 1424 ntBASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CCDC187A0A096LP49 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 AC093503.3-201ENST00000624917 2352 ntBASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC187A0A096LP49 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms