Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC132872.4-202ENST00000622924 2756 ntBASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC105917.1-201ENST00000506637 2539 ntBASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 AC104417.2-201ENST00000562989 1793 ntBASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV9-2A0A087WT02 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AL160286.2-201ENST00000567150 934 ntBASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TRAV9-2A0A087WT02 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms