Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 AC022532.1-201ENST00000624563 1728 ntBASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SPCS1Q9Y6A9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SPCS1Q9Y6A9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 AC116351.2-201ENST00000606540 1585 ntBASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 RPS2P35-201ENST00000443417 897 ntBASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.02□□□□□ -0.49
SPCS1Q9Y6A9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 SYT6-210ENST00000641643 1587 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AL731571.1-201ENST00000617058 5428 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 MIR3181-201ENST00000578512 73 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AL117332.1-201ENST00000622628 974 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AC092364.2-201ENST00000596710 2692 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 MTMR9LP-203ENST00000426597 1545 ntBASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS1Q9Y6A9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms