Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HS3ST3A1Q9Y663 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.19■□□□□ 0.34
HS3ST3A1Q9Y663 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 REXO1L11P-201ENST00000620964 1927 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 MRPL20P1-201ENST00000400819 433 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 MCCD1P2-201ENST00000423228 335 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC010327.4-202ENST00000591484 748 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC010654.1-201ENST00000615722 808 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC055717.3-201ENST00000622967 595 ntBASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HS3ST3A1Q9Y663 AC104581.1-202ENST00000635932 2618 ntBASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HS3ST3A1Q9Y663 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 AC002310.6-201ENST00000624451 1377 ntBASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.16■□□□□ 0.34
HS3ST3A1Q9Y663 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms