Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SNX9Q9Y5X1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 AL356309.3-201ENST00000624132 1934 ntBASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 SCARNA2-201ENST00000458748 420 ntBASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 IGHV3-52-201ENST00000519770 353 ntBASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SNX9Q9Y5X1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
SNX9Q9Y5X1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 SART3-203ENST00000546611 1184 ntBASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 AC132938.5-201ENST00000624980 1813 ntBASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.83■□□□□ 0.6
SNX9Q9Y5X1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MRPL3P1-201ENST00000400109 1033 ntBASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 FDX1P1-201ENST00000449115 551 ntBASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC002558.1-201ENST00000488906 803 ntBASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 NKAPP1-205ENST00000585790 367 ntBASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms