Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CDC42BPBQ9Y5S2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 KRT18P55-202ENST00000578578 1546 ntBASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 DUX4L27-201ENST00000554796 1261 ntBASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPBQ9Y5S2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 HNRNPRP1-201ENST00000453465 1695 ntBASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 AC079140.1-201ENST00000508039 487 ntBASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
CDC42BPBQ9Y5S2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 COPE-202ENST00000349893 948 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 HLA-DRB6-201ENST00000411500 1235 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 RN7SL589P-201ENST00000481268 310 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AC002056.1-201ENST00000395613 760 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 TFAMP1-201ENST00000412727 736 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 UGT1A2P-201ENST00000454886 866 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AC243562.1-201ENST00000560672 389 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 RARRES2P8-201ENST00000566335 367 ntBASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CDC42BPBQ9Y5S2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPBQ9Y5S2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC26.26■■□□□ 1.8
CDC42BPBQ9Y5S2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 CD81-202ENST00000381036 880 ntTSL 3 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CDC42BPBQ9Y5S2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms