Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 GPX1P2-201ENST00000429271 606 ntBASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 RNA5SP416-201ENST00000516838 111 ntBASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 AC079781.4-201ENST00000641908 219 ntBASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.46■□□□□ 0.23
PCDHGA9Q9Y5G4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDHGA9Q9Y5G4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PCDHGA9Q9Y5G4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.46■□□□□ 0.22
PCDHGA9Q9Y5G4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 UNC93B6-202ENST00000528242 690 ntBASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 AC126763.1-201ENST00000552015 2118 ntBASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDHGA9Q9Y5G4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 YBX2P1-201ENST00000394192 760 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AC010327.4-202ENST00000591484 748 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AC055717.3-201ENST00000622967 595 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 PGM5P2-202ENST00000637225 1043 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 ESPNP-201ENST00000270691 2015 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AC099343.3-201ENST00000605834 2503 ntBASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA9Q9Y5G4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms