Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 KRT89P-201ENST00000620027 1478 ntBASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MRPS28Q9Y2Q9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MRPS28Q9Y2Q9 AC016396.2-201ENST00000562575 1417 ntBASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 BX276092.7-203ENST00000637198 1536 ntBASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 TSPY15P-201ENST00000457163 923 ntBASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MRPS28Q9Y2Q9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPS28Q9Y2Q9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPS28Q9Y2Q9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MRPS28Q9Y2Q9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MRPS28Q9Y2Q9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
MRPS28Q9Y2Q9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms