Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 UNC93B5-201ENST00000530315 699 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 AC098934.4-201ENST00000564127 592 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 AL023875.1-201ENST00000640777 796 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 LINC00304-203ENST00000565008 1864 ntBASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ERGIC3Q9Y282 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AC090192.1-201ENST00000517740 490 ntBASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AC026271.3-201ENST00000571884 352 ntBASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AC069544.1-201ENST00000609399 999 ntBASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AC130371.2-201ENST00000619443 611 ntBASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ERGIC3Q9Y282 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 AC036111.1-201ENST00000533973 1582 ntBASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 AC009065.1-201ENST00000564055 1225 ntBASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 MIR3180-5-201ENST00000583743 153 ntBASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 AL353708.3-201ENST00000610272 989 ntBASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 AL031985.4-201ENST00000642138 673 ntBASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ERGIC3Q9Y282 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ERGIC3Q9Y282 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms