Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMC3Q9UQE7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 AC005104.2-201ENST00000427818 678 ntBASIC20.69■□□□□ 0.9
SMC3Q9UQE7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 BX664615.1-201ENST00000443558 458 ntBASIC20.69■□□□□ 0.9
SMC3Q9UQE7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 YBX1P2-201ENST00000489612 999 ntBASIC20.69■□□□□ 0.9
SMC3Q9UQE7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 AL353692.3-201ENST00000407031 1396 ntBASIC20.69■□□□□ 0.9
SMC3Q9UQE7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMC3Q9UQE7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 AL137013.1-201ENST00000432946 1228 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 MTCL1P1-201ENST00000446207 792 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 AC133561.5-201ENST00000635547 218 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 AC066615.1-201ENST00000640911 628 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 AC016396.2-201ENST00000562575 1417 ntBASIC20.68■□□□□ 0.9
SMC3Q9UQE7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SMC3Q9UQE7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC113347.1-201ENST00000413321 391 ntBASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC005363.2-201ENST00000618631 242 ntBASIC20.67■□□□□ 0.9
SMC3Q9UQE7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SMC3Q9UQE7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms