Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ENSA-206ENST00000361631 725 ntTSL 2 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 MIR770-201ENST00000390219 98 ntBASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 FAM185BP-201ENST00000443595 716 ntBASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.02■■□□□ 1.92
CDK11AQ9UQ88 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CDK11AQ9UQ88 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CDK11AQ9UQ88 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC27.01■■□□□ 1.92
CDK11AQ9UQ88 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 AC105339.1-204ENST00000636249 355 ntBASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC27.01■■□□□ 1.91
CDK11AQ9UQ88 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 AL020996.1-203ENST00000536896 2307 ntBASIC27■■□□□ 1.91
CDK11AQ9UQ88 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 AL139400.1-201ENST00000366220 510 ntBASIC27■■□□□ 1.91
CDK11AQ9UQ88 SYS1-203ENST00000414310 795 ntTSL 3 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 REXO1L3P-201ENST00000622202 1288 ntBASIC27■■□□□ 1.91
CDK11AQ9UQ88 AC093028.1-201ENST00000622998 982 ntBASIC27■■□□□ 1.91
CDK11AQ9UQ88 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27■■□□□ 1.91
CDK11AQ9UQ88 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC27■■□□□ 1.91
CDK11AQ9UQ88 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 AL121761.2-201ENST00000598007 1648 ntBASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 MCC-208ENST00000514701 2855 ntTSL 2 BASIC26.99■■□□□ 1.91
CDK11AQ9UQ88 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 GOLGA6L17P-202ENST00000614358 1398 ntBASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 FAM8A3P-201ENST00000427218 844 ntBASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 CYB561-216ENST00000582297 897 ntTSL 3 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 TK1-204ENST00000590430 683 ntTSL 3 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 AC092364.2-202ENST00000597012 1073 ntBASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 KRT18P55-202ENST00000578578 1546 ntBASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDK11AQ9UQ88 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
CDK11AQ9UQ88 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms