Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 AC104109.2-201ENST00000602919 1418 ntBASIC17.26■□□□□ 0.35
SATB2Q9UPW6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 AC135050.7-201ENST00000624508 2218 ntBASIC17.25■□□□□ 0.35
SATB2Q9UPW6 INTS4P1-201ENST00000438455 1935 ntBASIC17.25■□□□□ 0.35
SATB2Q9UPW6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 AC021087.4-201ENST00000563761 564 ntBASIC17.25■□□□□ 0.35
SATB2Q9UPW6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 BICD1-207ENST00000551848 1962 ntBASIC17.25■□□□□ 0.35
SATB2Q9UPW6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.25■□□□□ 0.35
SATB2Q9UPW6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SATB2Q9UPW6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 AC005104.2-201ENST00000427818 678 ntBASIC17.24■□□□□ 0.35
SATB2Q9UPW6 RPS2P1-201ENST00000434010 821 ntBASIC17.24■□□□□ 0.35
SATB2Q9UPW6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 AL691403.2-201ENST00000618460 490 ntBASIC17.24■□□□□ 0.35
SATB2Q9UPW6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SATB2Q9UPW6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 MYLKP1-201ENST00000509077 1580 ntBASIC17.23■□□□□ 0.35
SATB2Q9UPW6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 AP005117.1-201ENST00000584346 1413 ntBASIC17.23■□□□□ 0.35
SATB2Q9UPW6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SATB2Q9UPW6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms