Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP4E1Q9UPM8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 TP73-AS1-210ENST00000637775 1455 ntBASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 AC096582.2-201ENST00000510860 516 ntBASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 AC012615.1-201ENST00000565797 1299 ntBASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 AC109462.3-201ENST00000573934 613 ntBASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP4E1Q9UPM8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP4E1Q9UPM8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 LYSMD4-203ENST00000378904 2122 ntBASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP4E1Q9UPM8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP4E1Q9UPM8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms