Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 PP12613-201ENST00000424958 2230 ntBASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
PCDHA4Q9UN74 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 AC106795.1-205ENST00000512851 1056 ntBASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 AP005117.1-201ENST00000584346 1413 ntBASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHA4Q9UN74 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 AC003669.1-201ENST00000334569 611 ntBASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 UNC93B7-201ENST00000509439 705 ntBASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 IFNL4P1-201ENST00000607083 540 ntBASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHA4Q9UN74 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHA4Q9UN74 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 AKR1C7P-201ENST00000305623 895 ntBASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 KLF4P1-201ENST00000412782 1185 ntBASIC20.07■□□□□ 0.8
PCDHA4Q9UN74 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms