Protein–RNA interactions for Protein: Q9NRL3

STRN4, Striatin-4, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4Q9NRL3 CNN2P3-201ENST00000450201 906 ntBASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AC005225.4-201ENST00000557330 545 ntBASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AL136317.3-201ENST00000618497 906 ntBASIC23.17■■□□□ 1.3
STRN4Q9NRL3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
STRN4Q9NRL3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 AC002056.1-201ENST00000395613 760 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 SPDYE11-202ENST00000450699 704 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 SPDYE9P-201ENST00000570642 692 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 AC099522.2-201ENST00000607001 744 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 SPDYE10P-202ENST00000612005 668 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 SPDYE8P-202ENST00000612377 668 ntBASIC23.16■■□□□ 1.3
STRN4Q9NRL3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.16■■□□□ 1.3
STRN4Q9NRL3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 BX276092.7-203ENST00000637198 1536 ntBASIC23.15■■□□□ 1.3
STRN4Q9NRL3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 AL592309.1-201ENST00000443127 649 ntBASIC23.15■■□□□ 1.3
STRN4Q9NRL3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 AC051619.7-201ENST00000568314 623 ntBASIC23.15■■□□□ 1.3
STRN4Q9NRL3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
STRN4Q9NRL3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.3
STRN4Q9NRL3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC23.14■■□□□ 1.29
STRN4Q9NRL3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.14■■□□□ 1.29
STRN4Q9NRL3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 TFAMP1-201ENST00000412727 736 ntBASIC23.13■■□□□ 1.29
STRN4Q9NRL3 KRT18P32-201ENST00000424695 1287 ntBASIC23.13■■□□□ 1.29
STRN4Q9NRL3 FAM58DP-201ENST00000428076 619 ntBASIC23.13■■□□□ 1.29
STRN4Q9NRL3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC23.13■■□□□ 1.29
STRN4Q9NRL3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
STRN4Q9NRL3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms