Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 VENTXP5-201ENST00000523979 775 ntBASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 ZNF444P1-201ENST00000559497 298 ntBASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 AC022211.2-201ENST00000585075 2527 ntBASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 KRT89P-201ENST00000620027 1478 ntBASIC16.42■□□□□ 0.22
CTPS2Q9NRF8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 AC133963.1-201ENST00000504166 1679 ntBASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 AC113404.2-201ENST00000507884 177 ntBASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 AC083849.1-201ENST00000615227 514 ntBASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
CTPS2Q9NRF8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 LINC00304-203ENST00000565008 1864 ntBASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 MIR662-201ENST00000384847 95 ntBASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 SIRPAP1-201ENST00000448467 1770 ntBASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTPS2Q9NRF8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms