Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AC096633.1-201ENST00000422446 749 ntBASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AL691403.2-201ENST00000618460 490 ntBASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 PMPCAP1-201ENST00000508114 1576 ntBASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM9SF3Q9HD45 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AC010460.3-201ENST00000511359 1579 ntBASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AC122714.2-201ENST00000502787 707 ntBASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AC055717.3-201ENST00000622967 595 ntBASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 AL022326.1-202ENST00000641533 845 ntBASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM9SF3Q9HD45 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
TM9SF3Q9HD45 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 UPF3AP3-201ENST00000420996 769 ntBASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 AC126763.1-201ENST00000552015 2118 ntBASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TM9SF3Q9HD45 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms