Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 AL353692.3-201ENST00000407031 1396 ntBASIC18.55■□□□□ 0.56
CD248Q9HCU0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.54■□□□□ 0.56
CD248Q9HCU0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 KRT16P4-201ENST00000453883 522 ntBASIC18.54■□□□□ 0.56
CD248Q9HCU0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.54■□□□□ 0.56
CD248Q9HCU0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 AL163051.1-201ENST00000569214 1512 ntBASIC18.54■□□□□ 0.56
CD248Q9HCU0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD248Q9HCU0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 AKR1C7P-201ENST00000305623 895 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 AP002469.2-201ENST00000531724 424 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 Z69720.1-201ENST00000601483 472 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 AC138894.3-201ENST00000603787 634 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 AC124864.1-201ENST00000623408 392 ntBASIC18.53■□□□□ 0.56
CD248Q9HCU0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD248Q9HCU0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CD248Q9HCU0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.52■□□□□ 0.56
CD248Q9HCU0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CD248Q9HCU0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms