Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 AL121672.3-201ENST00000608644 468 ntBASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 AL358472.4-201ENST00000633140 710 ntBASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLK4Q9HAZ1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AP001094.4-201ENST00000579008 2176 ntBASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AL353692.3-201ENST00000407031 1396 ntBASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AC090616.6-201ENST00000582640 721 ntBASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AL023806.1-201ENST00000603994 1649 ntBASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLK4Q9HAZ1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 TSPY22P-201ENST00000427496 604 ntBASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 BX276092.5-203ENST00000456199 560 ntBASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.15■□□□□ 0.34
CLK4Q9HAZ1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms