Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC26.29■■□□□ 1.8
SCAF1Q9H7N4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 EIF2S2P3-201ENST00000428356 999 ntBASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 AP003733.1-201ENST00000491725 852 ntBASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 FLJ38576-201ENST00000623820 2459 ntBASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SCAF1Q9H7N4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 AL591684.3-201ENST00000605187 298 ntBASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 AL592071.1-201ENST00000611956 408 ntBASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCAF1Q9H7N4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC26.26■■□□□ 1.8
SCAF1Q9H7N4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC26.26■■□□□ 1.8
SCAF1Q9H7N4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 MIR3917-201ENST00000580971 93 ntBASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SCAF1Q9H7N4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 GPAT2P1-201ENST00000444924 1672 ntBASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 COX20P2-201ENST00000452636 358 ntBASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 AP005901.3-202ENST00000581653 237 ntBASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 AC092850.2-201ENST00000623821 2697 ntBASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms