Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 PGAM5P1-201ENST00000518923 814 ntBASIC20.49■□□□□ 0.87
SH2D4AQ9H788 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 AC139530.3-201ENST00000620344 690 ntBASIC20.49■□□□□ 0.87
SH2D4AQ9H788 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SH2D4AQ9H788 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 MIR1233-2-201ENST00000408138 82 ntBASIC20.48■□□□□ 0.87
SH2D4AQ9H788 MIR1233-1-201ENST00000408722 82 ntBASIC20.48■□□□□ 0.87
SH2D4AQ9H788 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AC148477.5-201ENST00000625164 1645 ntBASIC20.48■□□□□ 0.87
SH2D4AQ9H788 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 KRT18P55-202ENST00000578578 1546 ntBASIC20.48■□□□□ 0.87
SH2D4AQ9H788 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D4AQ9H788 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 AC040169.1-201ENST00000565382 521 ntBASIC20.47■□□□□ 0.87
SH2D4AQ9H788 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 AP000997.3-201ENST00000623333 2250 ntBASIC20.47■□□□□ 0.87
SH2D4AQ9H788 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SH2D4AQ9H788 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 BICD1-207ENST00000551848 1962 ntBASIC20.46■□□□□ 0.87
SH2D4AQ9H788 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 AC108751.1-201ENST00000490852 363 ntBASIC20.46■□□□□ 0.87
SH2D4AQ9H788 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SH2D4AQ9H788 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.87
SH2D4AQ9H788 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SH2D4AQ9H788 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms