Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PIF1Q9H611 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PIF1Q9H611 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.86■□□□□ 0.29
PIF1Q9H611 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.85■□□□□ 0.29
PIF1Q9H611 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PIF1Q9H611 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.85■□□□□ 0.29
PIF1Q9H611 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.85■□□□□ 0.29
PIF1Q9H611 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.85■□□□□ 0.29
PIF1Q9H611 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.85■□□□□ 0.29
PIF1Q9H611 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PIF1Q9H611 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PIF1Q9H611 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 LINC00167-201ENST00000530583 1419 ntBASIC16.85■□□□□ 0.29
PIF1Q9H611 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PIF1Q9H611 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PIF1Q9H611 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PIF1Q9H611 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PIF1Q9H611 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PIF1Q9H611 TSPY14P-201ENST00000303979 915 ntBASIC16.84■□□□□ 0.29
PIF1Q9H611 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 MIR1238-201ENST00000408483 83 ntBASIC16.84■□□□□ 0.29
PIF1Q9H611 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.84■□□□□ 0.29
PIF1Q9H611 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 SEC1P-202ENST00000473944 940 ntBASIC16.84■□□□□ 0.29
PIF1Q9H611 EGLN1P1-201ENST00000531623 762 ntBASIC16.84■□□□□ 0.29
PIF1Q9H611 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 AC116562.4-202ENST00000641738 218 ntBASIC16.84■□□□□ 0.29
PIF1Q9H611 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
PIF1Q9H611 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PIF1Q9H611 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.84■□□□□ 0.29
PIF1Q9H611 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.84■□□□□ 0.29
PIF1Q9H611 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PIF1Q9H611 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.83■□□□□ 0.29
PIF1Q9H611 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PIF1Q9H611 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.83■□□□□ 0.29
PIF1Q9H611 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PIF1Q9H611 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.83■□□□□ 0.29
PIF1Q9H611 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PIF1Q9H611 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.83■□□□□ 0.28
PIF1Q9H611 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PIF1Q9H611 INGX-201ENST00000359239 846 ntBASIC16.83■□□□□ 0.28
PIF1Q9H611 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.83■□□□□ 0.28
PIF1Q9H611 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PIF1Q9H611 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PIF1Q9H611 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.83■□□□□ 0.28
PIF1Q9H611 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PIF1Q9H611 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.83■□□□□ 0.28
PIF1Q9H611 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PIF1Q9H611 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
PIF1Q9H611 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms