Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UPF3BQ9BZI7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
UPF3BQ9BZI7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
UPF3BQ9BZI7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPF3BQ9BZI7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
UPF3BQ9BZI7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UPF3BQ9BZI7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 AD000864.1-201ENST00000624076 2295 ntBASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 BX276092.7-203ENST00000637198 1536 ntBASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 AC010460.3-201ENST00000511359 1579 ntBASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UPF3BQ9BZI7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UPF3BQ9BZI7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UPF3BQ9BZI7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 AL645929.1-201ENST00000420084 975 ntBASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UPF3BQ9BZI7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UPF3BQ9BZI7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms