Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK3BQ9BT76 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC096582.2-201ENST00000510860 516 ntBASIC12.28□□□□□ -0.44
UPK3BQ9BT76 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC005336.2-201ENST00000593183 939 ntBASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AL732292.2-201ENST00000609649 430 ntBASIC12.28□□□□□ -0.44
UPK3BQ9BT76 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC125634.1-201ENST00000438758 1403 ntBASIC12.28□□□□□ -0.44
UPK3BQ9BT76 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.28□□□□□ -0.44
UPK3BQ9BT76 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.27□□□□□ -0.44
UPK3BQ9BT76 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AC132938.6-201ENST00000623828 1655 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 NUS1P2-201ENST00000417358 873 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AC097374.2-201ENST00000618617 1306 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 PHGDH-209ENST00000641074 1780 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 OR6D1P-203ENST00000641209 4860 ntBASIC12.27□□□□□ -0.45
UPK3BQ9BT76 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.27□□□□□ -0.45
UPK3BQ9BT76 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms